I've received an explanation for the number of unclassified points in Nicollet county and the rest of the Minnesota River basin collect.
Data was classified into a number of different classes. The USGS Specification does not allow for the use of the standard Overlap class those points were sent back to class 1 (non ground). The overlap between flight lines was processed so there is a more equal distribution of points and the surface created from bare earth has the same density throughout the project. This project was collected with 50% overlap so when overlap points are classified that is roughly 50 percent of each individual swath (the outer 25% from each side of the field of view) that gets classed to "overlap". This makes for a very nice looking data set when making the bare earth surface and products. Since an overlap class was not delivered those points were assigned to class 1 non ground because they represent all elevations of points from the raw swath. Also, we ran a building and vegetation macro on the data as requested. The macro did a nice job but it was not part of the contract to edit those points. When doing this the macro also put points into the class 1 non ground class. This added some more points to class 1. The main contributor is the overlap as I mentioned above because the project was collected with so much overlap.
hope that helps explain the issue.
tim